Chemical ontology
WebApr 1, 2024 · Chemical Entities of Biological Interest (ChEBI) is a database and ontology of molecular entities focused on 'small' chemical compounds, that is part of the Open Biomedical Ontologies effort. WebSummary. In this chapter we present the On-To-Knowledge Methodology (OTKM) for introducing and maintaining ontology based knowledge management applications into enterprises with a focus on Knowledge Processes and Knowledge Meta Processes. While the former process circles around the usage of ontologies, the latter process guides their …
Chemical ontology
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WebCHMO, the chemical methods ontology, describes methods used to collect data in chemical experiments, such as mass spectrometry and electron microscopy prepare and separate material for further analysis, such as sample ionisation, chromatography, and electrophoresis synthesise materials, such as epitaxy and continuous vapour deposition … WebMay 30, 2024 · We aim to directly connect this ontology with the ioChem-BD database [34, 35], a central piece for our data management workflow. ioChem-BD is a service which …
WebThe ChEBI ontology is used to classify entities according to their structural and biological properties. For biological properties, the relationship has_role is used. For example, … WebFeb 7, 2024 · ontology-developments in the chemical related fields Ontologies about chemical analytical methods , Ontologies about …
WebDec 9, 2024 · The annotation of cognate ligand binding sites in UniProtKB using the chemical ontology ChEBI was made available from UniProt release 2024_03 of August 2024. This initial release featured 776 unique ligands from ChEBI, which were involved in over 980 000 binding site annotations for over 200 000 UniProtKB/Swiss-Prot protein … WebNov 4, 2016 · In contrast to biology, geology, and many other scientific disciplines, the world of chemistry still lacks a standardized chemical ontology or taxonomy. Several attempts at chemical...
WebJun 11, 2024 · Exploring a Chemistry Ontology Step 1. Reading the OWL file into a SPARQL Endpoint. Analogous to the previously described use case of a pizza …
WebChemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on 'small' chemical compounds. ... ChEBI Ontology: Automatic Xrefs: Reactions: Pathways: Models: ChEBI Name 2,3',5-trichlorobiphenyl: ChEBI ID … cowtown farmers market pilesgrove njWebOct 11, 2007 · Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds. The molecular … cowtown flea market new jerseyWebFeb 11, 2014 · FIX consists of two ontologies: methods and properties (but not objects, which are subject of the chemical ontology). The methods are applied to study the properties. Status: Alpha: Format: OBO: Contact: Chebi Administrators, [email protected]: Submissions. Version Released Uploaded Downloads; 1.2 (Parsed, … cowtown flea market nj hoursWebA view of a very preliminary draft version is shown below: One of the most important efforts of Chemical Semantics, Inc. is the development of a proper ontology for … cowtown flea market in woodstown njWebRelated Structures. chloroquine sulfate is a Structural Derivative of. sulfuric acid. Mass : 98.07948. Formula : H2O4S. oxoacid. Definition : A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion (s) (hydrons). Graph View. cowtown flea market new jersey addressWebDec 29, 2012 · Automated compound classification using a chemical ontology Authors Claudia Bobach 1 , Timo Böhme , Ulf Laube , Anett Püschel , Lutz Weber Affiliation 1 OntoChem GmbH, Heinrich-Damerow-Str, 4, Halle/Saale, D-06120, Germany. [email protected]. PMID: 23273256 PMCID: PMC3547776 DOI: 10.1186/1758 … cowtown flea market nj directionsWebglucosiduronic acid is a Structural Derivative of. carbohydrate acid. carbohydrate. Definition : Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols ... disney on ice 2022 maine